WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06A8.8c.1 Sequence Name  C06A8.8c.1
Length (nt)  798   Chromosome Location  II: 7766781-7769768
Chromosome . Primary Identifier  II Chromosome Location . Start  7766781
Chromosome Location . End  7769768 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06A8.8c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015517 cepr-104.2 C06A8.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06A8.8c C06A8.8c 507   II: 7767058-7767120

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C06A8.8c.1 7766781 7769768 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon58166   340   II: 7766781-7767120 Caenorhabditis elegans
Exon58176   75   II: 7767545-7767619 Caenorhabditis elegans
Exon58185   117   II: 7767666-7767782 Caenorhabditis elegans
Exon58193   107   II: 7769341-7769447 Caenorhabditis elegans
Exon58197   159   II: 7769610-7769768 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C06A8.8c.1 7766781 7769768 -1

1 Sequence

Length
798

1 Sequence Ontology Term

Identifier Name Description
transcript