WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05A6.6.1 Sequence Name  T05A6.6.1
Length (nt)  1134   Chromosome Location  II: 7825407-7826694
Chromosome . Primary Identifier  II Chromosome Location . Start  7825407
Chromosome Location . End  7826694 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05A6.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005809 srw-62 T05A6.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05A6.6 T05A6.6 1134   II: 7825407-7826132

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T05A6.6.1 7825407 7826694 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon58397   726   II: 7825407-7826132 Caenorhabditis elegans
Exon58398   224   II: 7826240-7826463 Caenorhabditis elegans
Exon58399   184   II: 7826511-7826694 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T05A6.6.1 7825407 7826694 1

1 Sequence

Length
1134

1 Sequence Ontology Term

Identifier Name Description
transcript