WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01H3.2.1 Sequence Name  T01H3.2.1
Length (nt)  3014   Chromosome Location  II: 7874238-7877994
Chromosome . Primary Identifier  II Chromosome Location . Start  7874238
Chromosome Location . End  7877994 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01H3.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011348 T01H3.2 T01H3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01H3.2 T01H3.2 2943   II: 7874303-7874454

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T01H3.2.1 7874238 7877994 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon58571   217   II: 7874238-7874454 Caenorhabditis elegans
Exon58572   60   II: 7874519-7874578 Caenorhabditis elegans
Exon58573   280   II: 7874627-7874906 Caenorhabditis elegans
Exon58574   96   II: 7874961-7875056 Caenorhabditis elegans
Exon58575   447   II: 7875104-7875550 Caenorhabditis elegans
Exon58576   99   II: 7875600-7875698 Caenorhabditis elegans
Exon58577   126   II: 7875759-7875884 Caenorhabditis elegans
Exon58579   223   II: 7875934-7876156 Caenorhabditis elegans
Exon58580   149   II: 7876201-7876349 Caenorhabditis elegans
Exon58581   114   II: 7876393-7876506 Caenorhabditis elegans
Exon58582   126   II: 7876557-7876682 Caenorhabditis elegans
Exon58583   129   II: 7876741-7876869 Caenorhabditis elegans
Exon58584   218   II: 7876918-7877135 Caenorhabditis elegans
Exon58585   475   II: 7877178-7877652 Caenorhabditis elegans
Exon58586   176   II: 7877695-7877870 Caenorhabditis elegans
Exon58587   79   II: 7877916-7877994 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T01H3.2.1 7874238 7877994 -1

1 Sequence

Length
3014

1 Sequence Ontology Term

Identifier Name Description
transcript