WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK669.1a.1 Sequence Name  ZK669.1a.1
Length (nt)  3932   Chromosome Location  II: 7912090-7928700
Chromosome . Primary Identifier  II Chromosome Location . Start  7912090
Chromosome Location . End  7928700 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK669.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014051 spv-1 ZK669.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK669.1a ZK669.1a 2901   II: 7913287-7913307

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK669.1a.1 7912090 7928700 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon58624   874   II: 7912090-7912963 Caenorhabditis elegans
Exon58628   133   II: 7913175-7913307 Caenorhabditis elegans
Exon58634   83   II: 7913998-7914080 Caenorhabditis elegans
Exon58641   150   II: 7914242-7914391 Caenorhabditis elegans
Exon58648   413   II: 7914545-7914957 Caenorhabditis elegans
Exon58655   341   II: 7915006-7915346 Caenorhabditis elegans
Exon58662   159   II: 7915394-7915552 Caenorhabditis elegans
Exon58669   304   II: 7915601-7915904 Caenorhabditis elegans
Exon58676   143   II: 7916204-7916346 Caenorhabditis elegans
Exon58684   81   II: 7917013-7917093 Caenorhabditis elegans
Exon58689   78   II: 7924191-7924268 Caenorhabditis elegans
Exon58693   180   II: 7924713-7924892 Caenorhabditis elegans
Exon58697   189   II: 7924937-7925125 Caenorhabditis elegans
Exon58701   203   II: 7925172-7925374 Caenorhabditis elegans
Exon58705   106   II: 7925538-7925643 Caenorhabditis elegans
Exon58709   73   II: 7926516-7926588 Caenorhabditis elegans
Exon58714   88   II: 7927458-7927545 Caenorhabditis elegans
Exon58718   138   II: 7928037-7928174 Caenorhabditis elegans
Exon58722   196   II: 7928505-7928700 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK669.1a.1 7912090 7928700 -1

1 Sequence

Length
3932

1 Sequence Ontology Term

Identifier Name Description
transcript