WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:ZK669.1a Sequence Name  ZK669.1a
Length (nt)  2901   Chromosome Location  II: 7913287-7913307
Chromosome . Primary Identifier  II Chromosome Location . Start  7913287
Chromosome Location . End  7913307
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK669.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE45712 SPV-1, isoform a 110.5 966 Caenorhabditis elegans
 

Other

16 RNAi

WormBase ID
WBRNAi00107879
WBRNAi00009489
WBRNAi00059635
WBRNAi00059636
WBRNAi00111068
WBRNAi00076895
WBRNAi00109616
WBRNAi00111710
WBRNAi00038405
WBRNAi00116265
WBRNAi00064781
WBRNAi00109228
WBRNAi00116152
WBRNAi00109325
WBRNAi00109519
WBRNAi00109422

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:ZK669.1a 7913287 7913307 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014051 spv-1 ZK669.1 Caenorhabditis elegans

18 Locations


Feature . Primary Identifier
Start End Strand
CDS:ZK669.1a 7913287 7913307 -1
CDS:ZK669.1a 7913998 7914080 -1
CDS:ZK669.1a 7914242 7914391 -1
CDS:ZK669.1a 7914545 7914957 -1
CDS:ZK669.1a 7915006 7915346 -1
CDS:ZK669.1a 7915394 7915552 -1
CDS:ZK669.1a 7915601 7915904 -1
CDS:ZK669.1a 7916204 7916346 -1
CDS:ZK669.1a 7917013 7917093 -1
CDS:ZK669.1a 7924191 7924268 -1
CDS:ZK669.1a 7924713 7924892 -1
CDS:ZK669.1a 7924937 7925125 -1
CDS:ZK669.1a 7925172 7925374 -1
CDS:ZK669.1a 7925538 7925643 -1
CDS:ZK669.1a 7926516 7926588 -1
CDS:ZK669.1a 7927458 7927545 -1
CDS:ZK669.1a 7928037 7928174 -1
CDS:ZK669.1a 7928505 7928655 -1

1 Sequence

Length
2901

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZK669.1a.1 ZK669.1a.1 3932   II: 7912090-7928700
Transcript:ZK669.1a.2 ZK669.1a.2 4000   II: 7912227-7928694