WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK669.1a.2 Sequence Name  ZK669.1a.2
Length (nt)  4000   Chromosome Location  II: 7912227-7928694
Chromosome . Primary Identifier  II Chromosome Location . Start  7912227
Chromosome Location . End  7928694 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK669.1a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014051 spv-1 ZK669.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK669.1a ZK669.1a 2901   II: 7913287-7913307

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK669.1a.2 7912227 7928694 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon58627   1081   II: 7912227-7913307 Caenorhabditis elegans
Exon58635   83   II: 7913998-7914080 Caenorhabditis elegans
Exon58642   150   II: 7914242-7914391 Caenorhabditis elegans
Exon58649   413   II: 7914545-7914957 Caenorhabditis elegans
Exon58656   341   II: 7915006-7915346 Caenorhabditis elegans
Exon58663   159   II: 7915394-7915552 Caenorhabditis elegans
Exon58670   304   II: 7915601-7915904 Caenorhabditis elegans
Exon58677   143   II: 7916204-7916346 Caenorhabditis elegans
Exon58685   81   II: 7917013-7917093 Caenorhabditis elegans
Exon58690   78   II: 7924191-7924268 Caenorhabditis elegans
Exon58694   180   II: 7924713-7924892 Caenorhabditis elegans
Exon58698   189   II: 7924937-7925125 Caenorhabditis elegans
Exon58702   203   II: 7925172-7925374 Caenorhabditis elegans
Exon58706   106   II: 7925538-7925643 Caenorhabditis elegans
Exon58710   73   II: 7926516-7926588 Caenorhabditis elegans
Exon58715   88   II: 7927458-7927545 Caenorhabditis elegans
Exon58719   138   II: 7928037-7928174 Caenorhabditis elegans
Exon58721   190   II: 7928505-7928694 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK669.1a.2 7912227 7928694 -1

1 Sequence

Length
4000

1 Sequence Ontology Term

Identifier Name Description
transcript