WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:ZK669.1d Sequence Name  ZK669.1d
Length (nt)  1527   Chromosome Location  II: 7913287-7913307
Chromosome . Primary Identifier  II Chromosome Location . Start  7913287
Chromosome Location . End  7913307
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK669.1d

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE45788 SPV-1, isoform d 57.7 508 Caenorhabditis elegans
 

Other

15 RNAi

WormBase ID
WBRNAi00107879
WBRNAi00009489
WBRNAi00059636
WBRNAi00111068
WBRNAi00076895
WBRNAi00109616
WBRNAi00111710
WBRNAi00038405
WBRNAi00116265
WBRNAi00064781
WBRNAi00109228
WBRNAi00116152
WBRNAi00109325
WBRNAi00109519
WBRNAi00109422

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:ZK669.1d 7913287 7913307 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014051 spv-1 ZK669.1 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:ZK669.1d 7913287 7913307 -1
CDS:ZK669.1d 7913998 7914080 -1
CDS:ZK669.1d 7914242 7914391 -1
CDS:ZK669.1d 7914545 7914957 -1
CDS:ZK669.1d 7915006 7915346 -1
CDS:ZK669.1d 7915394 7915552 -1
CDS:ZK669.1d 7915601 7915904 -1
CDS:ZK669.1d 7916204 7916259 -1

1 Sequence

Length
1527

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZK669.1d.1 ZK669.1d.1 2680   II: 7912093-7917095
Transcript:ZK669.1d.2 ZK669.1d.2 1615   II: 7913287-7916347