WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK669.1a.1 Sequence Name  ZK669.1a.1
Length (nt)  3932   Chromosome Location  II: 7912090-7928700
Chromosome . Primary Identifier  II Chromosome Location . Start  7912090
Chromosome Location . End  7928700 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK669.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014051 spv-1 ZK669.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK669.1a ZK669.1a 2901   II: 7913287-7913307

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK669.1a.1 7912090 7928700 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon58661   874   II: 7912090-7912963 Caenorhabditis elegans
Exon58665   133   II: 7913175-7913307 Caenorhabditis elegans
Exon58671   83   II: 7913998-7914080 Caenorhabditis elegans
Exon58678   150   II: 7914242-7914391 Caenorhabditis elegans
Exon58685   413   II: 7914545-7914957 Caenorhabditis elegans
Exon58692   341   II: 7915006-7915346 Caenorhabditis elegans
Exon58699   159   II: 7915394-7915552 Caenorhabditis elegans
Exon58706   304   II: 7915601-7915904 Caenorhabditis elegans
Exon58713   143   II: 7916204-7916346 Caenorhabditis elegans
Exon58721   81   II: 7917013-7917093 Caenorhabditis elegans
Exon58726   78   II: 7924191-7924268 Caenorhabditis elegans
Exon58730   180   II: 7924713-7924892 Caenorhabditis elegans
Exon58734   189   II: 7924937-7925125 Caenorhabditis elegans
Exon58738   203   II: 7925172-7925374 Caenorhabditis elegans
Exon58742   106   II: 7925538-7925643 Caenorhabditis elegans
Exon58746   73   II: 7926516-7926588 Caenorhabditis elegans
Exon58751   88   II: 7927458-7927545 Caenorhabditis elegans
Exon58755   138   II: 7928037-7928174 Caenorhabditis elegans
Exon58759   196   II: 7928505-7928700 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK669.1a.1 7912090 7928700 -1

1 Sequence

Length
3932

1 Sequence Ontology Term

Identifier Name Description
transcript