WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK669.1d.1 Sequence Name  ZK669.1d.1
Length (nt)  2680   Chromosome Location  II: 7912093-7917095
Chromosome . Primary Identifier  II Chromosome Location . Start  7912093
Chromosome Location . End  7917095 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK669.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014051 spv-1 ZK669.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK669.1d ZK669.1d 1527   II: 7913287-7913307

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK669.1d.1 7912093 7917095 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon58663   871   II: 7912093-7912963 Caenorhabditis elegans
Exon58667   133   II: 7913175-7913307 Caenorhabditis elegans
Exon58675   83   II: 7913998-7914080 Caenorhabditis elegans
Exon58682   150   II: 7914242-7914391 Caenorhabditis elegans
Exon58689   413   II: 7914545-7914957 Caenorhabditis elegans
Exon58696   341   II: 7915006-7915346 Caenorhabditis elegans
Exon58703   159   II: 7915394-7915552 Caenorhabditis elegans
Exon58710   304   II: 7915601-7915904 Caenorhabditis elegans
Exon58717   143   II: 7916204-7916346 Caenorhabditis elegans
Exon58725   83   II: 7917013-7917095 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK669.1d.1 7912093 7917095 -1

1 Sequence

Length
2680

1 Sequence Ontology Term

Identifier Name Description
transcript