WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK669.1e.1 Sequence Name  ZK669.1e.1
Length (nt)  2556   Chromosome Location  II: 7913287-7927301
Chromosome . Primary Identifier  II Chromosome Location . Start  7913287
Chromosome Location . End  7927301 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK669.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014051 spv-1 ZK669.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK669.1e ZK669.1e 2556   II: 7913287-7913307

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK669.1e.1 7913287 7927301 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon58669   21   II: 7913287-7913307 Caenorhabditis elegans
Exon58677   83   II: 7913998-7914080 Caenorhabditis elegans
Exon58684   150   II: 7914242-7914391 Caenorhabditis elegans
Exon58691   413   II: 7914545-7914957 Caenorhabditis elegans
Exon58698   341   II: 7915006-7915346 Caenorhabditis elegans
Exon58705   159   II: 7915394-7915552 Caenorhabditis elegans
Exon58712   304   II: 7915601-7915904 Caenorhabditis elegans
Exon58718   143   II: 7916204-7916346 Caenorhabditis elegans
Exon58724   81   II: 7917013-7917093 Caenorhabditis elegans
Exon58729   78   II: 7924191-7924268 Caenorhabditis elegans
Exon58733   180   II: 7924713-7924892 Caenorhabditis elegans
Exon58737   189   II: 7924937-7925125 Caenorhabditis elegans
Exon58741   203   II: 7925172-7925374 Caenorhabditis elegans
Exon58745   106   II: 7925538-7925643 Caenorhabditis elegans
Exon58749   73   II: 7926516-7926588 Caenorhabditis elegans
Exon58750   32   II: 7927270-7927301 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK669.1e.1 7913287 7927301 -1

1 Sequence

Length
2556

1 Sequence Ontology Term

Identifier Name Description
transcript