WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T05H10.6a Sequence Name  T05H10.6a
Length (nt)  1194   Chromosome Location  II: 8066482-8067014
Chromosome . Primary Identifier  II Chromosome Location . Start  8066482
Chromosome Location . End  8067014
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05H10.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE01643 PDHA-1, isoform a 43.8 397 Caenorhabditis elegans
 

Other

24 RNAi

WormBase ID
WBRNAi00095712
WBRNAi00108039
WBRNAi00085856
WBRNAi00115436
WBRNAi00071174
WBRNAi00000202
WBRNAi00052578
WBRNAi00009123
WBRNAi00084927
WBRNAi00035235
WBRNAi00110389
WBRNAi00110673
WBRNAi00102835
WBRNAi00084924
WBRNAi00096377
WBRNAi00096460
WBRNAi00096543
WBRNAi00096642
WBRNAi00110390
WBRNAi00108088
WBRNAi00115430
WBRNAi00115433
WBRNAi00106974
WBRNAi00102724

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T05H10.6a 8066482 8067014 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011510 pdha-1 T05H10.6 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:T05H10.6a 8066482 8067014 1
CDS:T05H10.6a 8067094 8067670 1
CDS:T05H10.6a 8067722 8067805 1

1 Sequence

Length
1194

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T05H10.6a.3 T05H10.6a.3 1639   II: 8066285-8068184
Transcript:T05H10.6a.1 T05H10.6a.1 1610   II: 8066445-8068184
Transcript:T05H10.6a.2 T05H10.6a.2 1607   II: 8066448-8068184