WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K02C4.3b.1 Sequence Name  K02C4.3b.1
Length (nt)  4214   Chromosome Location  II: 8080785-8086853
Chromosome . Primary Identifier  II Chromosome Location . Start  8080785
Chromosome Location . End  8086853 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K02C4.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010502 K02C4.3 K02C4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K02C4.3b K02C4.3b 3771   II: 8081222-8081320

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K02C4.3b.1 8080785 8086853 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon59086   536   II: 8080785-8081320 Caenorhabditis elegans
Exon59089   207   II: 8081833-8082039 Caenorhabditis elegans
Exon59094   334   II: 8082098-8082431 Caenorhabditis elegans
Exon59101   335   II: 8082743-8083077 Caenorhabditis elegans
Exon59105   64   II: 8083629-8083692 Caenorhabditis elegans
Exon59109   637   II: 8083739-8084375 Caenorhabditis elegans
Exon59113   353   II: 8084536-8084888 Caenorhabditis elegans
Exon59117   445   II: 8084934-8085378 Caenorhabditis elegans
Exon59121   553   II: 8085427-8085979 Caenorhabditis elegans
Exon59125   585   II: 8086049-8086633 Caenorhabditis elegans
Exon59130   165   II: 8086689-8086853 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K02C4.3b.1 8080785 8086853 -1

1 Sequence

Length
4214

1 Sequence Ontology Term

Identifier Name Description
transcript