WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C41C4.5a.1 Sequence Name  C41C4.5a.1
Length (nt)  3003   Chromosome Location  II: 8117170-8122909
Chromosome . Primary Identifier  II Chromosome Location . Start  8117170
Chromosome Location . End  8122909 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C41C4.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006832 unc-105 C41C4.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C41C4.5a C41C4.5a 2550   II: 8117267-8117309

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C41C4.5a.1 8117170 8122909 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon59209   140   II: 8117170-8117309 Caenorhabditis elegans
Exon59213   121   II: 8119008-8119128 Caenorhabditis elegans
Exon59220   103   II: 8119179-8119281 Caenorhabditis elegans
Exon59227   190   II: 8119329-8119518 Caenorhabditis elegans
Exon59234   249   II: 8119752-8120000 Caenorhabditis elegans
Exon59241   472   II: 8120047-8120518 Caenorhabditis elegans
Exon59248   262   II: 8120568-8120829 Caenorhabditis elegans
Exon59255   323   II: 8120888-8121210 Caenorhabditis elegans
Exon59262   309   II: 8121254-8121562 Caenorhabditis elegans
Exon59269   202   II: 8121773-8121974 Caenorhabditis elegans
Exon59276   182   II: 8122020-8122201 Caenorhabditis elegans
Exon59287   130   II: 8122253-8122382 Caenorhabditis elegans
Exon59292   320   II: 8122590-8122909 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C41C4.5a.1 8117170 8122909 1

1 Sequence

Length
3003

1 Sequence Ontology Term

Identifier Name Description
transcript