WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F10B5.8.1 Sequence Name  F10B5.8.1
Length (nt)  2085   Chromosome Location  II: 8141209-8143478
Chromosome . Primary Identifier  II Chromosome Location . Start  8141209
Chromosome Location . End  8143478 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F10B5.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008642 ints-11 F10B5.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F10B5.8 F10B5.8 1827   II: 8141286-8141639

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F10B5.8.1 8141209 8143478 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon59329   431   II: 8141209-8141639 Caenorhabditis elegans
Exon59330   84   II: 8141686-8141769 Caenorhabditis elegans
Exon59331   1231   II: 8141816-8143046 Caenorhabditis elegans
Exon59332   131   II: 8143098-8143228 Caenorhabditis elegans
Exon59333   208   II: 8143271-8143478 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F10B5.8.1 8141209 8143478 -1

1 Sequence

Length
2085

1 Sequence Ontology Term

Identifier Name Description
transcript