WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05C12.10.1 Sequence Name  T05C12.10.1
Length (nt)  3853   Chromosome Location  II: 8198803-8204004
Chromosome . Primary Identifier  II Chromosome Location . Start  8198803
Chromosome Location . End  8204004 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05C12.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004264 qua-1 T05C12.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05C12.10 T05C12.10 3510   II: 8198803-8198895

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T05C12.10.1 8198803 8204004 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon59441   93   II: 8198803-8198895 Caenorhabditis elegans
Exon59442   167   II: 8199193-8199359 Caenorhabditis elegans
Exon59443   163   II: 8199408-8199570 Caenorhabditis elegans
Exon59444   116   II: 8199841-8199956 Caenorhabditis elegans
Exon59445   70   II: 8200025-8200094 Caenorhabditis elegans
Exon59446   190   II: 8200140-8200329 Caenorhabditis elegans
Exon59447   1582   II: 8200406-8201987 Caenorhabditis elegans
Exon59448   120   II: 8202033-8202152 Caenorhabditis elegans
Exon59449   757   II: 8202229-8202985 Caenorhabditis elegans
Exon59450   169   II: 8203035-8203203 Caenorhabditis elegans
Exon59452   426   II: 8203579-8204004 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T05C12.10.1 8198803 8204004 1

1 Sequence

Length
3853

1 Sequence Ontology Term

Identifier Name Description
transcript