WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M110.1.1 Sequence Name  M110.1.1
Length (nt)  1634   Chromosome Location  II: 8204339-8207495
Chromosome . Primary Identifier  II Chromosome Location . Start  8204339
Chromosome Location . End  8207495 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M110.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000652 col-76 M110.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M110.1 M110.1 1500   II: 8204342-8204494

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M110.1.1 8204339 8207495 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon59490   156   II: 8204339-8204494 Caenorhabditis elegans
Exon59491   97   II: 8204541-8204637 Caenorhabditis elegans
Exon59492   421   II: 8204748-8205168 Caenorhabditis elegans
Exon59493   410   II: 8206055-8206464 Caenorhabditis elegans
Exon59494   284   II: 8206516-8206799 Caenorhabditis elegans
Exon59495   266   II: 8207230-8207495 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M110.1.1 8204339 8207495 1

1 Sequence

Length
1634

1 Sequence Ontology Term

Identifier Name Description
transcript