WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C26D10.5a Sequence Name  C26D10.5a
Length (nt)  1977   Chromosome Location  II: 8346694-8346850
Chromosome . Primary Identifier  II Chromosome Location . Start  8346694
Chromosome Location . End  8346850
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C26D10.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE03028 EFF-1, isoform a 74.4 658 Caenorhabditis elegans
 

Other

16 RNAi

WormBase ID
WBRNAi00114283
WBRNAi00114048
WBRNAi00114127
WBRNAi00114206
WBRNAi00107693
WBRNAi00107694
WBRNAi00113307
WBRNAi00107795
WBRNAi00027187
WBRNAi00041261
WBRNAi00011206
WBRNAi00024638
WBRNAi00102134
WBRNAi00029227
WBRNAi00113078
WBRNAi00113139

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C26D10.5a 8346694 8346850 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001159 eff-1 C26D10.5 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:C26D10.5a 8346694 8346850 1
CDS:C26D10.5a 8346979 8347166 1
CDS:C26D10.5a 8347214 8347452 1
CDS:C26D10.5a 8347502 8347804 1
CDS:C26D10.5a 8347853 8348000 1
CDS:C26D10.5a 8348057 8348195 1
CDS:C26D10.5a 8348244 8348925 1
CDS:C26D10.5a 8350074 8350194 1

1 Sequence

Length
1977

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C26D10.5a.1 C26D10.5a.1 2343   II: 8346690-8350556