WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49E12.12.1 Sequence Name  F49E12.12.1
Length (nt)  1249   Chromosome Location  II: 8381497-8383907
Chromosome . Primary Identifier  II Chromosome Location . Start  8381497
Chromosome Location . End  8383907 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49E12.12.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009904 F49E12.12 F49E12.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49E12.12 F49E12.12 1074   II: 8381503-8381733

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F49E12.12.1 8381497 8383907 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon60122   237   II: 8381497-8381733 Caenorhabditis elegans
Exon60123   213   II: 8381778-8381990 Caenorhabditis elegans
Exon60124   163   II: 8382410-8382572 Caenorhabditis elegans
Exon60125   101   II: 8382697-8382797 Caenorhabditis elegans
Exon60126   112   II: 8382844-8382955 Caenorhabditis elegans
Exon60127   82   II: 8383224-8383305 Caenorhabditis elegans
Exon60128   341   II: 8383567-8383907 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F49E12.12.1 8381497 8383907 1

1 Sequence

Length
1249

1 Sequence Ontology Term

Identifier Name Description
transcript