WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F49E12.1 Sequence Name  F49E12.1
Length (nt)  1968   Chromosome Location  II: 8400410-8400512
Chromosome . Primary Identifier  II Chromosome Location . Start  8400410
Chromosome Location . End  8400512
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49E12.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE03378 SKPO-1 73.5 655 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00047849
WBRNAi00015316
WBRNAi00032537

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F49E12.1 8400410 8400512 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009897 skpo-1 F49E12.1 Caenorhabditis elegans

16 Locations


Feature . Primary Identifier
Start End Strand
CDS:F49E12.1 8400410 8400512 -1
CDS:F49E12.1 8401060 8401268 -1
CDS:F49E12.1 8401316 8401381 -1
CDS:F49E12.1 8401430 8401487 -1
CDS:F49E12.1 8401987 8402112 -1
CDS:F49E12.1 8402225 8402410 -1
CDS:F49E12.1 8402639 8402803 -1
CDS:F49E12.1 8402848 8402972 -1
CDS:F49E12.1 8403021 8403083 -1
CDS:F49E12.1 8403126 8403234 -1
CDS:F49E12.1 8403280 8403383 -1
CDS:F49E12.1 8403582 8403691 -1
CDS:F49E12.1 8403899 8404132 -1
CDS:F49E12.1 8404184 8404331 -1
CDS:F49E12.1 8404375 8404487 -1
CDS:F49E12.1 8404796 8404844 -1

1 Sequence

Length
1968

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F49E12.1.1 F49E12.1.1 2083   II: 8400299-8404848