WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49E12.5b.1 Sequence Name  F49E12.5b.1
Length (nt)  827   Chromosome Location  II: 8407685-8409211
Chromosome . Primary Identifier  II Chromosome Location . Start  8407685
Chromosome Location . End  8409211 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49E12.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005039 sra-13 F49E12.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49E12.5b F49E12.5b 525   II: 8407685-8407975

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F49E12.5b.1 8407685 8409211 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon60159   291   II: 8407685-8407975 Caenorhabditis elegans
Exon60162   222   II: 8408127-8408348 Caenorhabditis elegans
Exon60165   187   II: 8408852-8409038 Caenorhabditis elegans
Exon60166   127   II: 8409085-8409211 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F49E12.5b.1 8407685 8409211 1

1 Sequence

Length
827

1 Sequence Ontology Term

Identifier Name Description
transcript