WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W01C9.3b.1 Sequence Name  W01C9.3b.1
Length (nt)  2750   Chromosome Location  II: 8540720-8545381
Chromosome . Primary Identifier  II Chromosome Location . Start  8540720
Chromosome Location . End  8545381 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W01C9.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004155 pqn-73 W01C9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W01C9.3b W01C9.3b 2520   II: 8540720-8540783

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W01C9.3b.1 8540720 8545381 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon60676   64   II: 8540720-8540783 Caenorhabditis elegans
Exon60678   75   II: 8541609-8541683 Caenorhabditis elegans
Exon60682   80   II: 8541762-8541841 Caenorhabditis elegans
Exon60686   105   II: 8541901-8542005 Caenorhabditis elegans
Exon60689   99   II: 8542077-8542175 Caenorhabditis elegans
Exon60692   242   II: 8542259-8542500 Caenorhabditis elegans
Exon60696   265   II: 8542742-8543006 Caenorhabditis elegans
Exon60700   204   II: 8543051-8543254 Caenorhabditis elegans
Exon60704   82   II: 8543372-8543453 Caenorhabditis elegans
Exon60708   695   II: 8543549-8544243 Caenorhabditis elegans
Exon60712   47   II: 8544291-8544337 Caenorhabditis elegans
Exon60716   99   II: 8544382-8544480 Caenorhabditis elegans
Exon60720   114   II: 8544528-8544641 Caenorhabditis elegans
Exon60724   214   II: 8544694-8544907 Caenorhabditis elegans
Exon60728   110   II: 8544959-8545068 Caenorhabditis elegans
Exon60733   255   II: 8545127-8545381 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W01C9.3b.1 8540720 8545381 1

1 Sequence

Length
2750

1 Sequence Ontology Term

Identifier Name Description
transcript