WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:D2085.1 Sequence Name  D2085.1
Length (nt)  6597   Chromosome Location  II: 8651134-8651218
Chromosome . Primary Identifier  II Chromosome Location . Start  8651134
Chromosome Location . End  8651218
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2085.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE41886 PYR-1 242.6 2198 Caenorhabditis elegans
 

Other

15 RNAi

WormBase ID
WBRNAi00043500
WBRNAi00008581
WBRNAi00066888
WBRNAi00082356
WBRNAi00082357
WBRNAi00082355
WBRNAi00082358
WBRNAi00093900
WBRNAi00093946
WBRNAi00092939
WBRNAi00082297
WBRNAi00082301
WBRNAi00082306
WBRNAi00082307
WBRNAi00082354

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:D2085.1 8651134 8651218 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004259 pyr-1 D2085.1 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:D2085.1 8651134 8651218 1
CDS:D2085.1 8651265 8651596 1
CDS:D2085.1 8651662 8652062 1
CDS:D2085.1 8652182 8652472 1
CDS:D2085.1 8652517 8652898 1
CDS:D2085.1 8652950 8653480 1
CDS:D2085.1 8653537 8654162 1
CDS:D2085.1 8654231 8655651 1
CDS:D2085.1 8655700 8656394 1
CDS:D2085.1 8656448 8656894 1
CDS:D2085.1 8656940 8657155 1
CDS:D2085.1 8657203 8657931 1
CDS:D2085.1 8657977 8658417 1

1 Sequence

Length
6597

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:D2085.1.1 D2085.1.1 6931   II: 8651109-8658726