WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T01B7.5b Sequence Name  T01B7.5b
Length (nt)  570   Chromosome Location  II: 8718550-8718663
Chromosome . Primary Identifier  II Chromosome Location . Start  8718550
Chromosome Location . End  8718663
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01B7.5b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE38216 T01B7.5, isoform b 21.6 189 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00008008
WBRNAi00035000
WBRNAi00071188
WBRNAi00026140
WBRNAi00009089

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T01B7.5b 8718550 8718663 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011311 T01B7.5 T01B7.5 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:T01B7.5b 8718550 8718663 1
CDS:T01B7.5b 8718709 8718867 1
CDS:T01B7.5b 8719034 8719186 1
CDS:T01B7.5b 8719933 8720076 1

1 Sequence

Length
570

1 Sequence Ontology Term

Identifier Name Description
CDS  

6 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T01B7.5b.2 T01B7.5b.2 1464   II: 8716828-8721683
Transcript:T01B7.5b.1 T01B7.5b.1 1465   II: 8716828-8721688
Transcript:T01B7.5b.3 T01B7.5b.3 1379   II: 8717008-8721683
Transcript:T01B7.5b.4 T01B7.5b.4 1171   II: 8717169-8721682
Transcript:T01B7.5b.5 T01B7.5b.5 2298   II: 8718382-8721683
Transcript:T01B7.5b.6 T01B7.5b.6 872   II: 8718383-8721689