WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01B7.9.1 Sequence Name  T01B7.9.1
Length (nt)  543   Chromosome Location  II: 8725533-8726800
Chromosome . Primary Identifier  II Chromosome Location . Start  8725533
Chromosome Location . End  8726800 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01B7.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011314 nssp-20 T01B7.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01B7.9 T01B7.9 432   II: 8725623-8725742

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T01B7.9.1 8725533 8726800 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon61638   210   II: 8725533-8725742 Caenorhabditis elegans
Exon61639   61   II: 8726072-8726132 Caenorhabditis elegans
Exon61640   127   II: 8726184-8726310 Caenorhabditis elegans
Exon61641   145   II: 8726656-8726800 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T01B7.9.1 8725533 8726800 -1

1 Sequence

Length
543

1 Sequence Ontology Term

Identifier Name Description
transcript