WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K08F8.6.1 Sequence Name  K08F8.6.1
Length (nt)  9278   Chromosome Location  II: 8770975-8782020
Chromosome . Primary Identifier  II Chromosome Location . Start  8770975
Chromosome Location . End  8782020 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08F8.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002295 let-19 K08F8.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08F8.6 K08F8.6 8589   II: 8771077-8771091

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K08F8.6.1 8770975 8782020 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon61758   117   II: 8770975-8771091 Caenorhabditis elegans
Exon61759   213   II: 8771211-8771423 Caenorhabditis elegans
Exon61760   160   II: 8771471-8771630 Caenorhabditis elegans
Exon61761   295   II: 8771679-8771973 Caenorhabditis elegans
Exon61762   707   II: 8772024-8772730 Caenorhabditis elegans
Exon61763   267   II: 8772895-8773161 Caenorhabditis elegans
Exon61764   195   II: 8773206-8773400 Caenorhabditis elegans
Exon61765   202   II: 8773605-8773806 Caenorhabditis elegans
Exon61766   171   II: 8773853-8774023 Caenorhabditis elegans
Exon61767   394   II: 8774081-8774474 Caenorhabditis elegans
Exon61768   180   II: 8774866-8775045 Caenorhabditis elegans
Exon61769   561   II: 8775091-8775651 Caenorhabditis elegans
Exon61770   96   II: 8775732-8775827 Caenorhabditis elegans
Exon61771   1489   II: 8775877-8777365 Caenorhabditis elegans
Exon61772   264   II: 8777473-8777736 Caenorhabditis elegans
Exon61773   1386   II: 8777786-8779171 Caenorhabditis elegans
Exon61774   586   II: 8779265-8779850 Caenorhabditis elegans
Exon61775   814   II: 8779900-8780713 Caenorhabditis elegans
Exon61776   351   II: 8780767-8781117 Caenorhabditis elegans
Exon61777   830   II: 8781191-8782020 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K08F8.6.1 8770975 8782020 1

1 Sequence

Length
9278

1 Sequence Ontology Term

Identifier Name Description
transcript