WormMine: Gene WBGene00198905

• WormBase Gene ID: WBGene00198905
• Gene Name: T07D4.6
• Sequence Name: T07D4.6
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by ints-5 and etr-1 based on RNA-seq studies.
• Biotype: SO:0001263
• Genetic Position: :±
• Length (nt): 178

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00198905

Genomics

1 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:T07D4.6	T07D4.6	178	II: 8875072-8875249

Other

0 CDSs

0 RNAi Result

7 Allele

• gk963801
• gk963053
• gk962682
• gk962798
• gk964215
• gk696128
• WBVar01792236

1 Chromosome

• WormBase ID: II
• Organism: Caenorhabditis elegans
• Length (nt): 15279421

1 Chromosome Location

• Feature . Primary Identifier: WBGene00198905
• Start: 8875072
• End: 8875249
• Strand: -1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

1 Downstream Intergenic Region

• WormBase ID: intergenic_region_chrII_8873943..8875071
• Length (nt): 1129
• Chromosome Location: II: 8873943-8875071
• Organism: Caenorhabditis elegans

2 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Transcripts that showed significantly increased expression in ints-5(RNAi) comparing to in N2.	DESeq2 and edgeR.	WBPaper00056284:ints-5(RNAi)_upregulated
	Transcripts of noncoding genes that showed significantly increased expression in muscle.	DESeq2 (version 1.24.0). Transcripts with a false-discovery rate adjusted p-value less than 0.05 were considered significantly differentially expressed.	WBPaper00062325:muscle_enriched_noncoding-RNA

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00198905
• Start: 8875072
• End: 8875249
• Strand: -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 178

1 Sequence Ontology Term