WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C18E9.10a.1 Sequence Name  C18E9.10a.1
Length (nt)  892   Chromosome Location  II: 8955237-8964149
Chromosome . Primary Identifier  II Chromosome Location . Start  8955237
Chromosome Location . End  8964149 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18E9.10a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007690 sftd-3 C18E9.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C18E9.10a C18E9.10a 708   II: 8955415-8955523

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C18E9.10a.1 8955237 8964149 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon62167   287   II: 8955237-8955523 Caenorhabditis elegans
Exon62171   59   II: 8957199-8957257 Caenorhabditis elegans
Exon62178   118   II: 8961763-8961880 Caenorhabditis elegans
Exon62181   86   II: 8962174-8962259 Caenorhabditis elegans
Exon62184   121   II: 8962591-8962711 Caenorhabditis elegans
Exon62188   99   II: 8963883-8963981 Caenorhabditis elegans
Exon62191   122   II: 8964028-8964149 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C18E9.10a.1 8955237 8964149 -1

1 Sequence

Length
892

1 Sequence Ontology Term

Identifier Name Description
transcript