WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C18E9.10a Sequence Name  C18E9.10a
Length (nt)  708   Chromosome Location  II: 8955415-8955523
Chromosome . Primary Identifier  II Chromosome Location . Start  8955415
Chromosome Location . End  8955523
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18E9.10a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE20520 SFTD-3, isoform a 25.7 235 Caenorhabditis elegans
 

Other

12 RNAi

WormBase ID
WBRNAi00095499
WBRNAi00000934
WBRNAi00040948
WBRNAi00011006
WBRNAi00076152
WBRNAi00029081
WBRNAi00071191
WBRNAi00065335
WBRNAi00024594
WBRNAi00008422
WBRNAi00106225
WBRNAi00110793

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C18E9.10a 8955415 8955523 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007690 sftd-3 C18E9.10 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:C18E9.10a 8955415 8955523 -1
CDS:C18E9.10a 8957199 8957257 -1
CDS:C18E9.10a 8961763 8961880 -1
CDS:C18E9.10a 8962174 8962259 -1
CDS:C18E9.10a 8962591 8962711 -1
CDS:C18E9.10a 8963883 8963981 -1
CDS:C18E9.10a 8964028 8964143 -1

1 Sequence

Length
708

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C18E9.10a.1 C18E9.10a.1 892   II: 8955237-8964149