WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T23G7.5a.1 Sequence Name  T23G7.5a.1
Length (nt)  948   Chromosome Location  II: 9177338-9178633
Chromosome . Primary Identifier  II Chromosome Location . Start  9177338
Chromosome Location . End  9178633 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T23G7.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011967 pir-1 T23G7.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T23G7.5a T23G7.5a 702   II: 9177384-9177466

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T23G7.5a.1 9177338 9178633 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon62949   129   II: 9177338-9177466 Caenorhabditis elegans
Exon62950   243   II: 9177663-9177905 Caenorhabditis elegans
Exon62953   98   II: 9177956-9178053 Caenorhabditis elegans
Exon62954   111   II: 9178109-9178219 Caenorhabditis elegans
Exon62957   367   II: 9178267-9178633 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T23G7.5a.1 9177338 9178633 1

1 Sequence

Length
948

1 Sequence Ontology Term

Identifier Name Description
transcript