WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T23G7.5a Sequence Name  T23G7.5a
Length (nt)  702   Chromosome Location  II: 9177384-9177466
Chromosome . Primary Identifier  II Chromosome Location . Start  9177384
Chromosome Location . End  9177466
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T23G7.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48135 PIR-1, isoform a 27.0 233 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00053985
WBRNAi00019111
WBRNAi00035894
WBRNAi00008086

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T23G7.5a 9177384 9177466 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011967 pir-1 T23G7.5 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:T23G7.5a 9177384 9177466 1
CDS:T23G7.5a 9177663 9177905 1
CDS:T23G7.5a 9177956 9178053 1
CDS:T23G7.5a 9178109 9178219 1
CDS:T23G7.5a 9178267 9178433 1

1 Sequence

Length
702

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T23G7.5a.1 T23G7.5a.1 948   II: 9177338-9178633