WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T23G7.4.1 Sequence Name  T23G7.4.1
Length (nt)  2816   Chromosome Location  II: 9173166-9177152
Chromosome . Primary Identifier  II Chromosome Location . Start  9173166
Chromosome Location . End  9177152 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T23G7.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004752 sec-5 T23G7.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T23G7.4 T23G7.4 2655   II: 9173322-9173436

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T23G7.4.1 9173166 9177152 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon62973   271   II: 9173166-9173436 Caenorhabditis elegans
Exon62974   295   II: 9173485-9173779 Caenorhabditis elegans
Exon62975   124   II: 9174450-9174573 Caenorhabditis elegans
Exon62976   339   II: 9174619-9174957 Caenorhabditis elegans
Exon62977   98   II: 9175006-9175103 Caenorhabditis elegans
Exon62978   295   II: 9175167-9175461 Caenorhabditis elegans
Exon62979   416   II: 9175508-9175923 Caenorhabditis elegans
Exon62980   235   II: 9175982-9176216 Caenorhabditis elegans
Exon62981   196   II: 9176269-9176464 Caenorhabditis elegans
Exon62982   369   II: 9176509-9176877 Caenorhabditis elegans
Exon62983   106   II: 9176926-9177031 Caenorhabditis elegans
Exon62984   72   II: 9177081-9177152 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T23G7.4.1 9173166 9177152 -1

1 Sequence

Length
2816

1 Sequence Ontology Term

Identifier Name Description
transcript