WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1067.1c.1 Sequence Name  ZK1067.1c.1
Length (nt)  4262   Chromosome Location  II: 9197518-9207213
Chromosome . Primary Identifier  II Chromosome Location . Start  9197518
Chromosome Location . End  9207213 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1067.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002299 let-23 ZK1067.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1067.1c ZK1067.1c 3987   II: 9197518-9197647

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1067.1c.1 9197518 9207213 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon63023   130   II: 9197518-9197647 Caenorhabditis elegans
Exon63027   68   II: 9198941-9199008 Caenorhabditis elegans
Exon63030   159   II: 9199189-9199347 Caenorhabditis elegans
Exon63035   154   II: 9199433-9199586 Caenorhabditis elegans
Exon63039   219   II: 9199637-9199855 Caenorhabditis elegans
Exon63043   267   II: 9200018-9200284 Caenorhabditis elegans
Exon63047   117   II: 9200352-9200468 Caenorhabditis elegans
Exon63052   91   II: 9200556-9200646 Caenorhabditis elegans
Exon63056   350   II: 9201054-9201403 Caenorhabditis elegans
Exon63060   130   II: 9201462-9201591 Caenorhabditis elegans
Exon63064   222   II: 9201639-9201860 Caenorhabditis elegans
Exon63068   181   II: 9203988-9204168 Caenorhabditis elegans
Exon63072   282   II: 9204212-9204493 Caenorhabditis elegans
Exon63076   156   II: 9204552-9204707 Caenorhabditis elegans
Exon63080   1104   II: 9205054-9206157 Caenorhabditis elegans
Exon63084   79   II: 9206211-9206289 Caenorhabditis elegans
Exon63088   108   II: 9206343-9206450 Caenorhabditis elegans
Exon63093   445   II: 9206769-9207213 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1067.1c.1 9197518 9207213 1

1 Sequence

Length
4262

1 Sequence Ontology Term

Identifier Name Description
transcript