WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1067.2a.1 Sequence Name  ZK1067.2a.1
Length (nt)  7077   Chromosome Location  II: 9215213-9223150
Chromosome . Primary Identifier  II Chromosome Location . Start  9215213
Chromosome Location . End  9223150 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1067.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014208 znfx-1 ZK1067.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1067.2a ZK1067.2a 6639   II: 9215235-9215651

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1067.2a.1 9215213 9223150 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon63115   439   II: 9215213-9215651 Caenorhabditis elegans
Exon63116   321   II: 9215763-9216083 Caenorhabditis elegans
Exon63119   723   II: 9216130-9216852 Caenorhabditis elegans
Exon63122   889   II: 9216897-9217785 Caenorhabditis elegans
Exon63125   529   II: 9217871-9218399 Caenorhabditis elegans
Exon63128   322   II: 9218469-9218790 Caenorhabditis elegans
Exon63131   138   II: 9218836-9218973 Caenorhabditis elegans
Exon63134   174   II: 9219029-9219202 Caenorhabditis elegans
Exon63137   449   II: 9219247-9219695 Caenorhabditis elegans
Exon63140   187   II: 9219745-9219931 Caenorhabditis elegans
Exon63143   126   II: 9219981-9220106 Caenorhabditis elegans
Exon63146   569   II: 9220188-9220756 Caenorhabditis elegans
Exon63149   343   II: 9220808-9221150 Caenorhabditis elegans
Exon63152   1224   II: 9221194-9222417 Caenorhabditis elegans
Exon63155   130   II: 9222461-9222590 Caenorhabditis elegans
Exon63159   514   II: 9222637-9223150 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1067.2a.1 9215213 9223150 1

1 Sequence

Length
7077

1 Sequence Ontology Term

Identifier Name Description
transcript