WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:D2013.8a Sequence Name  D2013.8a
Length (nt)  3264   Chromosome Location  II: 9334053-9334126
Chromosome . Primary Identifier  II Chromosome Location . Start  9334053
Chromosome Location . End  9334126
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2013.8a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE32616 SCP-1, isoform a 124.6 1087 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00001489
WBRNAi00043445
WBRNAi00007970
WBRNAi00012565
WBRNAi00076258
WBRNAi00030383
WBRNAi00007499

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:D2013.8a 9334053 9334126 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004744 scp-1 D2013.8 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:D2013.8a 9334053 9334126 1
CDS:D2013.8a 9334484 9334626 1
CDS:D2013.8a 9334670 9335101 1
CDS:D2013.8a 9335150 9335244 1
CDS:D2013.8a 9335294 9336251 1
CDS:D2013.8a 9336300 9336390 1
CDS:D2013.8a 9336969 9337344 1
CDS:D2013.8a 9337395 9337612 1
CDS:D2013.8a 9337661 9337859 1
CDS:D2013.8a 9337911 9338348 1
CDS:D2013.8a 9338451 9338576 1
CDS:D2013.8a 9338624 9338737 1

1 Sequence

Length
3264

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:D2013.8a.1 D2013.8a.1 3462   II: 9334014-9338896