WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R09D1.6.1 Sequence Name  R09D1.6.1
Length (nt)  1531   Chromosome Location  II: 9452636-9454404
Chromosome . Primary Identifier  II Chromosome Location . Start  9452636
Chromosome Location . End  9454404 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R09D1.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011162 chil-19 R09D1.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R09D1.6 R09D1.6 1359   II: 9452701-9453520

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R09D1.6.1 9452636 9454404 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon63831   885   II: 9452636-9453520 Caenorhabditis elegans
Exon63832   286   II: 9453564-9453849 Caenorhabditis elegans
Exon63833   60   II: 9453903-9453962 Caenorhabditis elegans
Exon63834   143   II: 9454056-9454198 Caenorhabditis elegans
Exon63835   157   II: 9454248-9454404 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R09D1.6.1 9452636 9454404 -1

1 Sequence

Length
1531

1 Sequence Ontology Term

Identifier Name Description
transcript