WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R134.1a.1 Sequence Name  R134.1a.1
Length (nt)  3423   Chromosome Location  II: 9502757-9507281
Chromosome . Primary Identifier  II Chromosome Location . Start  9502757
Chromosome Location . End  9507281 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R134.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001530 gcy-3 R134.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R134.1a R134.1a 3423   II: 9502757-9503184

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R134.1a.1 9502757 9507281 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon63899   428   II: 9502757-9503184 Caenorhabditis elegans
Exon63901   104   II: 9503278-9503381 Caenorhabditis elegans
Exon63903   408   II: 9503429-9503836 Caenorhabditis elegans
Exon63906   178   II: 9503896-9504073 Caenorhabditis elegans
Exon63908   301   II: 9504120-9504420 Caenorhabditis elegans
Exon63910   651   II: 9504464-9505114 Caenorhabditis elegans
Exon63912   131   II: 9505395-9505525 Caenorhabditis elegans
Exon63914   265   II: 9505570-9505834 Caenorhabditis elegans
Exon63916   98   II: 9505878-9505975 Caenorhabditis elegans
Exon63918   153   II: 9506038-9506190 Caenorhabditis elegans
Exon63920   230   II: 9506239-9506468 Caenorhabditis elegans
Exon63922   243   II: 9506516-9506758 Caenorhabditis elegans
Exon63924   131   II: 9506984-9507114 Caenorhabditis elegans
Exon63926   102   II: 9507180-9507281 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R134.1a.1 9502757 9507281 -1

1 Sequence

Length
3423

1 Sequence Ontology Term

Identifier Name Description
transcript