WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R134.1b.1 Sequence Name  R134.1b.1
Length (nt)  3417   Chromosome Location  II: 9502757-9507281
Chromosome . Primary Identifier  II Chromosome Location . Start  9502757
Chromosome Location . End  9507281 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R134.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001530 gcy-3 R134.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R134.1b R134.1b 3417   II: 9502757-9503184

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R134.1b.1 9502757 9507281 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon63900   428   II: 9502757-9503184 Caenorhabditis elegans
Exon63902   104   II: 9503278-9503381 Caenorhabditis elegans
Exon63904   408   II: 9503429-9503836 Caenorhabditis elegans
Exon63907   178   II: 9503896-9504073 Caenorhabditis elegans
Exon63909   301   II: 9504120-9504420 Caenorhabditis elegans
Exon63911   651   II: 9504464-9505114 Caenorhabditis elegans
Exon63913   125   II: 9505401-9505525 Caenorhabditis elegans
Exon63915   265   II: 9505570-9505834 Caenorhabditis elegans
Exon63917   98   II: 9505878-9505975 Caenorhabditis elegans
Exon63919   153   II: 9506038-9506190 Caenorhabditis elegans
Exon63921   230   II: 9506239-9506468 Caenorhabditis elegans
Exon63923   243   II: 9506516-9506758 Caenorhabditis elegans
Exon63925   131   II: 9506984-9507114 Caenorhabditis elegans
Exon63927   102   II: 9507180-9507281 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R134.1b.1 9502757 9507281 -1

1 Sequence

Length
3417

1 Sequence Ontology Term

Identifier Name Description
transcript