WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:E02H1.7.1 Sequence Name  E02H1.7.1
Length (nt)  1786   Chromosome Location  II: 9598180-9605526
Chromosome . Primary Identifier  II Chromosome Location . Start  9598180
Chromosome Location . End  9605526 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
E02H1.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003618 nhr-19 E02H1.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:E02H1.7 E02H1.7 1434   II: 9598475-9598540

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:E02H1.7.1 9598180 9605526 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon64109   361   II: 9598180-9598540 Caenorhabditis elegans
Exon64110   185   II: 9598772-9598956 Caenorhabditis elegans
Exon64112   166   II: 9599005-9599170 Caenorhabditis elegans
Exon64114   336   II: 9599256-9599591 Caenorhabditis elegans
Exon64116   79   II: 9599663-9599741 Caenorhabditis elegans
Exon64118   157   II: 9599795-9599951 Caenorhabditis elegans
Exon64120   128   II: 9600102-9600229 Caenorhabditis elegans
Exon64122   94   II: 9600283-9600376 Caenorhabditis elegans
Exon64124   126   II: 9600807-9600932 Caenorhabditis elegans
Exon64126   103   II: 9605146-9605248 Caenorhabditis elegans
Exon64128   51   II: 9605476-9605526 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:E02H1.7.1 9598180 9605526 -1

1 Sequence

Length
1786

1 Sequence Ontology Term

Identifier Name Description
transcript