WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T15H9.2.1 Sequence Name  T15H9.2.1
Length (nt)  964   Chromosome Location  II: 9615800-9617125
Chromosome . Primary Identifier  II Chromosome Location . Start  9615800
Chromosome Location . End  9617125 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T15H9.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011788 hal-3 T15H9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T15H9.2 T15H9.2 759   II: 9616003-9616227

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T15H9.2.1 9615800 9617125 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon64143   428   II: 9615800-9616227 Caenorhabditis elegans
Exon64144   142   II: 9616279-9616420 Caenorhabditis elegans
Exon64145   109   II: 9616468-9616576 Caenorhabditis elegans
Exon64146   75   II: 9616642-9616716 Caenorhabditis elegans
Exon64147   121   II: 9616780-9616900 Caenorhabditis elegans
Exon64148   89   II: 9617037-9617125 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T15H9.2.1 9615800 9617125 -1

1 Sequence

Length
964

1 Sequence Ontology Term

Identifier Name Description
transcript