WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T15H9.7a.1 Sequence Name  T15H9.7a.1
Length (nt)  2245   Chromosome Location  II: 9617469-9624176
Chromosome . Primary Identifier  II Chromosome Location . Start  9617469
Chromosome Location . End  9624176 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T15H9.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001038 dnj-20 T15H9.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T15H9.7a T15H9.7a 1068   II: 9618640-9618837

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T15H9.7a.1 9617469 9624176 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon64149   1369   II: 9617469-9618837 Caenorhabditis elegans
Exon64152   124   II: 9619120-9619243 Caenorhabditis elegans
Exon64154   122   II: 9622969-9623090 Caenorhabditis elegans
Exon64155   171   II: 9623148-9623318 Caenorhabditis elegans
Exon64156   66   II: 9623427-9623492 Caenorhabditis elegans
Exon64157   165   II: 9623592-9623756 Caenorhabditis elegans
Exon64158   96   II: 9623893-9623988 Caenorhabditis elegans
Exon64159   132   II: 9624045-9624176 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T15H9.7a.1 9617469 9624176 -1

1 Sequence

Length
2245

1 Sequence Ontology Term

Identifier Name Description
transcript