WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y53C12A.8b.1 Sequence Name  Y53C12A.8b.1
Length (nt)  921   Chromosome Location  II: 9698276-9700414
Chromosome . Primary Identifier  II Chromosome Location . Start  9698276
Chromosome Location . End  9700414 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53C12A.8b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044158 Y53C12A.8 Y53C12A.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y53C12A.8b Y53C12A.8b 636   II: 9698382-9698398

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y53C12A.8b.1 9698276 9700414 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon64310   123   II: 9698276-9698398 Caenorhabditis elegans
Exon64313   172   II: 9698716-9698887 Caenorhabditis elegans
Exon64315   153   II: 9698936-9699088 Caenorhabditis elegans
Exon64317   138   II: 9699147-9699284 Caenorhabditis elegans
Exon64319   81   II: 9699328-9699408 Caenorhabditis elegans
Exon64321   103   II: 9699463-9699565 Caenorhabditis elegans
Exon64322   151   II: 9700264-9700414 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y53C12A.8b.1 9698276 9700414 -1

1 Sequence

Length
921

1 Sequence Ontology Term

Identifier Name Description
transcript