WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y53C12B.6.1 Sequence Name  Y53C12B.6.1
Length (nt)  1377   Chromosome Location  II: 9721758-9724673
Chromosome . Primary Identifier  II Chromosome Location . Start  9721758
Chromosome Location . End  9724673 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53C12B.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013145 cutl-2 Y53C12B.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y53C12B.6 Y53C12B.6 1149   II: 9721839-9722150

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y53C12B.6.1 9721758 9724673 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon64369   393   II: 9721758-9722150 Caenorhabditis elegans
Exon64370   222   II: 9722342-9722563 Caenorhabditis elegans
Exon64371   116   II: 9723164-9723279 Caenorhabditis elegans
Exon64372   238   II: 9723370-9723607 Caenorhabditis elegans
Exon64373   194   II: 9723765-9723958 Caenorhabditis elegans
Exon64374   214   II: 9724460-9724673 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y53C12B.6.1 9721758 9724673 -1

1 Sequence

Length
1377

1 Sequence Ontology Term

Identifier Name Description
transcript