WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1321.2b.1 Sequence Name  ZK1321.2b.1
Length (nt)  1886   Chromosome Location  II: 9758232-9768276
Chromosome . Primary Identifier  II Chromosome Location . Start  9758232
Chromosome Location . End  9768276 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1321.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014261 shk-1 ZK1321.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1321.2b ZK1321.2b 1575   II: 9758254-9758378

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1321.2b.1 9758232 9768276 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon64454   147   II: 9758232-9758378 Caenorhabditis elegans
Exon64458   129   II: 9761951-9762079 Caenorhabditis elegans
Exon64463   120   II: 9765426-9765545 Caenorhabditis elegans
Exon64469   84   II: 9765687-9765770 Caenorhabditis elegans
Exon64475   93   II: 9765815-9765907 Caenorhabditis elegans
Exon64483   100   II: 9766352-9766451 Caenorhabditis elegans
Exon64489   173   II: 9766607-9766779 Caenorhabditis elegans
Exon64495   158   II: 9766830-9766987 Caenorhabditis elegans
Exon64501   109   II: 9767032-9767140 Caenorhabditis elegans
Exon64507   93   II: 9767187-9767279 Caenorhabditis elegans
Exon64513   181   II: 9767328-9767508 Caenorhabditis elegans
Exon64519   20   II: 9767594-9767613 Caenorhabditis elegans
Exon64525   100   II: 9767724-9767823 Caenorhabditis elegans
Exon64534   379   II: 9767898-9768276 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1321.2b.1 9758232 9768276 1

1 Sequence

Length
1886

1 Sequence Ontology Term

Identifier Name Description
transcript