WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C08H9.1 Sequence Name  C08H9.1
Length (nt)  1554   Chromosome Location  II: 9875179-9875342
Chromosome . Primary Identifier  II Chromosome Location . Start  9875179
Chromosome Location . End  9875342
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C08H9.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE54048 CTSA-3.2 59.0 517 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00040141
WBRNAi00010490
WBRNAi00076102
WBRNAi00028699
WBRNAi00084812
WBRNAi00084810
WBRNAi00084809
WBRNAi00084811
WBRNAi00088982
WBRNAi00084813

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C08H9.1 9875179 9875342 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007462 ctsa-3.2 C08H9.1 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:C08H9.1 9875179 9875342 1
CDS:C08H9.1 9875391 9875556 1
CDS:C08H9.1 9875884 9876020 1
CDS:C08H9.1 9876074 9876298 1
CDS:C08H9.1 9876344 9876413 1
CDS:C08H9.1 9876460 9876566 1
CDS:C08H9.1 9876735 9876843 1
CDS:C08H9.1 9876895 9877049 1
CDS:C08H9.1 9877150 9877228 1
CDS:C08H9.1 9877294 9877402 1
CDS:C08H9.1 9877449 9877570 1
CDS:C08H9.1 9877764 9877874 1

1 Sequence

Length
1554

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C08H9.1.1 C08H9.1.1 1567   II: 9875179-9877887