WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C08H9.1.1 Sequence Name  C08H9.1.1
Length (nt)  1567   Chromosome Location  II: 9875179-9877887
Chromosome . Primary Identifier  II Chromosome Location . Start  9875179
Chromosome Location . End  9877887 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C08H9.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007462 ctsa-3.2 C08H9.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C08H9.1 C08H9.1 1554   II: 9875179-9875342

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C08H9.1.1 9875179 9877887 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon64777   164   II: 9875179-9875342 Caenorhabditis elegans
Exon64778   166   II: 9875391-9875556 Caenorhabditis elegans
Exon64779   137   II: 9875884-9876020 Caenorhabditis elegans
Exon64780   225   II: 9876074-9876298 Caenorhabditis elegans
Exon64781   70   II: 9876344-9876413 Caenorhabditis elegans
Exon64782   107   II: 9876460-9876566 Caenorhabditis elegans
Exon64783   109   II: 9876735-9876843 Caenorhabditis elegans
Exon64784   155   II: 9876895-9877049 Caenorhabditis elegans
Exon64785   79   II: 9877150-9877228 Caenorhabditis elegans
Exon64786   109   II: 9877294-9877402 Caenorhabditis elegans
Exon64787   122   II: 9877449-9877570 Caenorhabditis elegans
Exon64788   124   II: 9877764-9877887 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C08H9.1.1 9875179 9877887 1

1 Sequence

Length
1567

1 Sequence Ontology Term

Identifier Name Description
transcript