WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C08H9.2 Sequence Name  C08H9.2
Length (nt)  3663   Chromosome Location  II: 9887042-9887239
Chromosome . Primary Identifier  II Chromosome Location . Start  9887042
Chromosome Location . End  9887239
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C08H9.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE23530 VGLN-1 134.3 1220 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00008375
WBRNAi00040147
WBRNAi00072921
WBRNAi00024510
WBRNAi00072922
WBRNAi00033455
WBRNAi00113346
WBRNAi00113347
WBRNAi00072923

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C08H9.2 9887042 9887239 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007463 vgln-1 C08H9.2 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:C08H9.2 9887042 9887239 -1
CDS:C08H9.2 9887285 9887902 -1
CDS:C08H9.2 9887953 9889119 -1
CDS:C08H9.2 9889169 9890559 -1
CDS:C08H9.2 9890607 9890876 -1
CDS:C08H9.2 9890923 9890941 -1

1 Sequence

Length
3663

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C08H9.2.1 C08H9.2.1 4301   II: 9886544-9891081