WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R53.7a.1 Sequence Name  R53.7a.1
Length (nt)  1819   Chromosome Location  II: 9971118-9974704
Chromosome . Primary Identifier  II Chromosome Location . Start  9971118
Chromosome Location . End  9974704 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R53.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011276 aakg-5 R53.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R53.7a R53.7a 1383   II: 9971554-9971715

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R53.7a.1 9971118 9974704 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon65208   598   II: 9971118-9971715 Caenorhabditis elegans
Exon65209   824   II: 9971825-9972648 Caenorhabditis elegans
Exon65212   309   II: 9972860-9973168 Caenorhabditis elegans
Exon65216   88   II: 9974617-9974704 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R53.7a.1 9971118 9974704 -1

1 Sequence

Length
1819

1 Sequence Ontology Term

Identifier Name Description
transcript