WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK892.1b.2 Sequence Name  ZK892.1b.2
Length (nt)  1391   Chromosome Location  II: 9991112-10000349
Chromosome . Primary Identifier  II Chromosome Location . Start  9991112
Chromosome Location . End  10000349 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK892.1b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002266 lec-3 ZK892.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK892.1b ZK892.1b 858   II: 9991409-9991429

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK892.1b.2 9991112 10000349 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon65230   128   II: 9991112-9991239 Caenorhabditis elegans
Exon65235   61   II: 9991369-9991429 Caenorhabditis elegans
Exon65248   89   II: 9994276-9994364 Caenorhabditis elegans
Exon65256   88   II: 9994419-9994506 Caenorhabditis elegans
Exon65266   132   II: 9995620-9995751 Caenorhabditis elegans
Exon65274   108   II: 9997979-9998086 Caenorhabditis elegans
Exon65282   92   II: 9998375-9998466 Caenorhabditis elegans
Exon65290   70   II: 9998512-9998581 Caenorhabditis elegans
Exon65306   123   II: 9999202-9999324 Caenorhabditis elegans
Exon65314   500   II: 9999850-10000349 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK892.1b.2 9991112 10000349 1

1 Sequence

Length
1391

1 Sequence Ontology Term

Identifier Name Description
transcript