WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK892.1f.1 Sequence Name  ZK892.1f.1
Length (nt)  1014   Chromosome Location  II: 9991160-9999984
Chromosome . Primary Identifier  II Chromosome Location . Start  9991160
Chromosome Location . End  9999984 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK892.1f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002266 lec-3 ZK892.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK892.1f ZK892.1f 1014   II: 9991160-9991239

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK892.1f.1 9991160 9999984 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon65232   80   II: 9991160-9991239 Caenorhabditis elegans
Exon65236   61   II: 9991369-9991429 Caenorhabditis elegans
Exon65252   89   II: 9994276-9994364 Caenorhabditis elegans
Exon65261   88   II: 9994419-9994506 Caenorhabditis elegans
Exon65270   132   II: 9995620-9995751 Caenorhabditis elegans
Exon65278   108   II: 9997979-9998086 Caenorhabditis elegans
Exon65286   92   II: 9998375-9998466 Caenorhabditis elegans
Exon65294   70   II: 9998512-9998581 Caenorhabditis elegans
Exon65298   36   II: 9998694-9998729 Caenorhabditis elegans
Exon65309   123   II: 9999202-9999324 Caenorhabditis elegans
Exon65310   135   II: 9999850-9999984 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK892.1f.1 9991160 9999984 1

1 Sequence

Length
1014

1 Sequence Ontology Term

Identifier Name Description
transcript