WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK892.5.1 Sequence Name  ZK892.5.1
Length (nt)  895   Chromosome Location  II: 10008217-10009450
Chromosome . Primary Identifier  II Chromosome Location . Start  10008217
Chromosome Location . End  10009450 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK892.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014129 ZK892.5 ZK892.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK892.5 ZK892.5 762   II: 10008281-10008285

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK892.5.1 10008217 10009450 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon65336   69   II: 10008217-10008285 Caenorhabditis elegans
Exon65337   100   II: 10008345-10008444 Caenorhabditis elegans
Exon65338   160   II: 10008489-10008648 Caenorhabditis elegans
Exon65339   307   II: 10008704-10009010 Caenorhabditis elegans
Exon65342   82   II: 10009104-10009185 Caenorhabditis elegans
Exon65343   87   II: 10009229-10009315 Caenorhabditis elegans
Exon65344   90   II: 10009361-10009450 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK892.5.1 10008217 10009450 1

1 Sequence

Length
895

1 Sequence Ontology Term

Identifier Name Description
transcript